VCPA
Introduction
Step 1: Set up the Amazon Web Services (AWS) environment
Step 2: Create your tracking database instance
- Option 1: Setup sample tracking database using Public AMI (recommended)
- Option 2: Setup sample tracking database using Docker
Step 3: Configure your project information in the tracking database
- 3.1 List all projects in the tracking database
- 3.2 Create the project in the tracking database
Step 4: Upload sequencing data to your S3 bucket
Step 5: Configure your samples information in the tracking database
Step 6: Submit a job to process one whole genome (WGS) / whole exome (WES) sample
Step 7: Review quality metrics of processed data
Step 8: Generating Project-level VCF via joint genotyping
Optional: Change software versions and dependencies of the VCPA workflow

Powered by GitBook

On this page

Step 1: Set up the Amazon Web Services (AWS) environment

1.1 Create AWS account

PreviousStep 1: Set up the Amazon Web Services (AWS) environment Next1.2 Configure your computing environment and login to AWS

Last updated 6 years ago

Use your AWS account email address and password to sign in to the AWS Management Console as the AWS account root user.